rs31813445 SNP Detail

Summary

• ID
  rs31813445
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:190733678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACACACACA CCAGGGTCCA AACATGAATC TTTATTGGCT
  TTGGCTATTT CAGGGGGATG AAGTGGGAGC CATGGGTGGT ACCAATACCA GACTTCATCG
  R
  CTTGTAGGGG ATGGAGAACT CATCCAGGTA GTAGCCGATC AACTCGGTTT GATCTCCACC
  TGGTTGAAAG GTCTTGCTGT TGTACATGCC CACCATGCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45072975	mCV25261059	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146500600	ENSMUSSNP1052064	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss320194536	CHEV_1_192825360	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31813445					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190733678 () rs orientation: forward

Symbol	Name	Function Class
Gm8407	predicted gene 8407	within coordinates
Gm37095	predicted gene, 37095	683 bp upstream
Gm70616	predicted gene, 70616	1225 bp upstream
Rr426021	regulatory region 426021	919 bp proximal