rs31815198 SNP Detail

Summary

• ID
  rs31815198
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92899185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTG GCTTGCTCAG CTTGCTTTCT
  Y
  ATAGAACCCA GGACCACCAG CCCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39328888	mCV24931937	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C	T
ss325064826	CHEV_15_92831735	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31815198					SNP	T	C	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92899185 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	214 bp upstream
Gm62083	predicted gene, 62083	within coordinates
Rr391110	regulatory region 391110	within coordinates
Rr508114	regulatory region 508114	212 bp proximal
Rr508115	regulatory region 508115	595 bp proximal
Rr508116	regulatory region 508116	746 bp proximal
Rr508117	regulatory region 508117	885 bp proximal
Rr508118	regulatory region 508118	1108 bp proximal
Tssr132761	transcription start site region 132761	900 bp upstream