rs31820263 SNP Detail

Summary

• ID
  rs31820263
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79161929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG ACACACACAC ACACGCACAC
  R
  GACACATGGA CACACACACG GACAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46072550	mCV25275449	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss145132905	ENSMUSSNP4673893	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss322278698	CHEV_7_86657067	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31820263					SNP	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79161929 () rs orientation: forward

Symbol	Name	Function Class
2900037B21Rik	RIKEN cDNA 2900037B21 gene	743 bp upstream
A330074H02Rik	RIKEN cDNA A330074H02 gene	781 bp downstream
Gm72212	predicted gene, 72212	within coordinates
Mir9-3hg	Mir9-3 host gene	within coordinates
Rr649637	regulatory region 649637	1771 bp distal
Rr649638	regulatory region 649638	within coordinates
Rr649639	regulatory region 649639	1255 bp proximal