rs31821773 SNP Detail

Summary

• ID
  rs31821773
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:83185130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAT CACACCTTGT GAGAGCTGCC
  R
  GGATTACAAC TTGTGAGGGG TGCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39329372	mCV24800400	ABI	CRAMUS_MOUSE	f	SNP		A	A					A		G
ss63574343	NES17025315	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		G	G	G	A		A	A		A
ss148237961	ENSMUSSNP5754987	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							G
ss325036153	CHEV_15_83131359	CHEVERUD	SCREENING_POP	f	SNP													G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs31821773					SNP	A	A	A	A	A	A	A	A	G	G	G	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63574343	NES17025315	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:83185130 () rs orientation: forward

Symbol	Name	Function Class
Arfgap3	ARF GTPase activating protein 3	within coordinates
Rr304705	regulatory region 304705	1730 bp distal
Rr314787	regulatory region 314787	within coordinates
Rr314788	regulatory region 314788	1472 bp proximal