rs31822544 SNP Detail

Summary

• ID
  rs31822544
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:102678343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAACAAAC AACAGCAATA
  GTAACAACCC TCCCCAATGG ACAGTTAACA ATGAATACCT TATGACAAAC CTTGACTATG
  ACTGAGTTTA TAACAAAAGG ATTAGTGAGC TTTTATAATT CTTTTTTTGT CCTGTAAACC
  CAAGTCCTCA AGAAATGCAA CTCATTTTTA CACTGGAAAC CACATTCTTT TCAACCCTAG
  K
  GTCTATACAT CATTCTAGGC ATTATCACTG AGCTATGTAC CCAGCCCTGG ATTCTGCATT
  TGCATCCCTT CAAATCATCT GGAATTTTAT TTCTCCTGTG CTCAAGAGAG TCAGAGTTGA
  ACAGGAAAAA AAGATCTTAC ACTTTATCAA GGCTCATTCA AGGTTAGACT TCTTTATTTC
  TTCTCCTAGG TAATTCTTTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49778932	NES12394146	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31822544					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49778932	NES12394146	PERLEGEN	MM_PANEL	f	SNP	G/T