rs31826275 SNP Detail

Summary

• ID
  rs31826275
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:96486716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATATTTTCA CTTCCTTTGG CATGTCACTC
  TCTGCTCCAG AATTTATAAA ACAAAACACG TCTACAGTTT TTGAACCTGT GTTTCTTAGA
  GTGGTATTAA GAACCAGAGT GAATGGAAGA CTTCTAAAAA TCATAAGTCA CACCTTTgcc
  R
  tgtatgcaga ctgtttgatt agactgaggg gtgagagtct gaaagctgca gatcaagagc
  ccaaagtata acaggctatc atcttaatcg ccatctccca tcagcatctc tatctgacct
  aatatccttt tgactatcag acaaatacct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45074897	mCV23788314	ABI	CRAMUS_MOUSE	f	SNP		A	G					G
ss51309952	NES14502719	PERLEGEN	MM_PANEL2	f	SNP	A		G	A	G	G	G		A	G	A		A	A	G	A
ss144986058	ENSMUSSNP1204172	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss319853053	CHEV_1_98455568	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs31826275					SNP	A	A	G	A	G	G	G	G	A	G	A	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51309952	NES14502719	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:96486716 () rs orientation: forward

Symbol	Name	Function Class
Gm70795	predicted gene, 70795	876 bp downstream