rs31831841 SNP Detail

Summary

• ID
  rs31831841
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129509722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAACCTTTAT TTAATATTCT ATGAGGAGGG GGTACTCGCT ATTCGCTATT CTTGACTCTA
  ACTTTATTAC GTCTTCCTGG CAAAACAACT AAAACCACCT CCTTAAACTT TCTTCCTAAA
  ATCATTCAAA TCATTTCTAT AGTCATTAAT TCATGTAAAC AGCATTGATT TGTGAAAGTT
  CATCTTCATG TTGATCTGCA GGACATTTGC CCAGTGGGGT GGCTGTCACT GGGAAGTGAT
  TACAGCAGCT ATAGGCAGTG AGGGTCTCCC GGTGTCCACT CACACCAAGT CACGTGTGTG
  W
  GGAGTGTGGC AATGACAGAC ATGAGGAAGC ACATCAGCAG CCAGAAGCAA TTCTGGGACG
  AAGTCTCTGG GGCCATGCCT CACCCGAGGA CACCCATGGC AGCCGAGCAA GCAAGACGGT
  GAGCCAGCTG TCTCCAGGGC TTGCCCACAC AGCTCCTCCT GCATGGCAGC CAAGAATCCA
  AGGAAAACTT TTATTCTCCA GGATCCTCCC ACCCTACTTA CCCCAAGAGG AGGTCAAATT
  TGGTTTAAGT CCCAGGCAGA AGGTAAAAAG GCATGTCCTT CTTTCTCTTA GCCTGAGATC
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45576227	mCV24827633	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss147444606	ENSMUSSNP5400673	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs31831841					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129509722 () rs orientation: forward

Symbol	Name	Function Class
Dcdc2b	doublecortin domain containing 2b	1672 bp upstream
Iqcc	IQ motif containing C	within coordinates
Rr600294	regulatory region 600294	1530 bp distal
Tssr43540	transcription start site region 43540	1649 bp upstream