rs31832113 SNP Detail

Summary

• ID
  rs31832113
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34144386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGGTAGA TGCAGCGACT
  TAACATGTGA GTGGGGGGAC ATTTAGGGGC AACAGGGGCT TGCAAGGAGT TGGTACTGGG
  AGAAGAGGGG CTGGTATTAG GTTGTAAAGT AAATAAATAC TTTCTGTAAG TATTAAAAAA
  TAAATCTGGG GGAGATGGCT CAATCCTTAA AGTGTGGTAG ATAACTAAAT CCCACATTTA
  R
  AAAACCTGGA TGTATTAGTG TGAACATGTA ATCTCTGTAA TAGGGAGGCT TGCCGGCAGC
  CAGTCTAATC AAATTGTTGA GTTACAAGGT CAGAGAGACC CTGCCTTTAT AAAGGTATGA
  AGAGTTATCT AAGAGGACAG CTGTGTTAAT CCCTGGTTTA CACACATGCA CACCTGCACA
  AACAAATACA TACTCATAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39330949	mCV23546331	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147538357	ENSMUSSNP2819009	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31832113					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34144386 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	703 bp downstream
Tssr131026	transcription start site region 131026	1710 bp downstream
Tssr131027	transcription start site region 131027	1275 bp downstream
Tssr131028	transcription start site region 131028	1136 bp downstream
Tssr131029	transcription start site region 131029	312 bp downstream