rs31833167 SNP Detail

Summary

• ID
  rs31833167
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:99698520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATCTTTCC AGCCCGAAGT
  CTTTACTTTT TAATATTTTA TTTTTGGTTA TGTATATTAA TAGGATTCAG TGGCATATTT
  CCATATATGG ATACATCTTG TACCAATCAA ATCCAACCTC CTTTTATCTA TACTTTCTAT
  ACTTTCAACT TTCTCCAATG TATTTAAATC ACTCTTCTTC ATTGGAATCA AAATTTCTGA
  M
  TTTTATATGA AAGAGCACAC ATTATATCTT TCTATGCACA CATTATATCT TTCTATGTCT
  GACTTACTTC ATTTAAAATA ATGTCCTCTA CTTCTGTCCA TTTTAATTCA AAAGACAAGT
  CTTCATTCTT TATTTAGTGT TGGGATCTGA GGTAAAGAGA GCATGAGTTT AAGGTCATAG
  TGAGCTCAAG GTGAACTTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49780434	NES12398453	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	A	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31833167					SNP	A	C	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49780434	NES12398453	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:99698520 () rs orientation: forward

Symbol	Name	Function Class
Kif4	kinesin family member 4	within coordinates
Rr692768	regulatory region 692768	1859 bp distal
Tssr161616	transcription start site region 161616	1533 bp upstream