rs31834183 SNP Detail

Summary

• ID
  rs31834183
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:99508690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT ACATCCACCC ATTCTGTGTC
  W
  GTCTCAGGAT AATGCTGTAT AGACA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46073569	mCV24185791	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss145517558	ENSMUSSNP6764157	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31834183					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:99508690 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19472	CpG island 19472	154 bp distal
Rr400465	regulatory region 400465	354 bp downstream
Rr652012	regulatory region 652012	357 bp distal
Spcs2	signal peptidase complex subunit 2 homolog (S. cerevisiae)	within coordinates
Tssr68077	transcription start site region 68077	363 bp downstream
Tssr68078	transcription start site region 68078	343 bp downstream
Tssr73711	transcription start site region 73711	1180 bp upstream
Tssr73712	transcription start site region 73712	577 bp upstream
Tssr73713	transcription start site region 73713	562 bp upstream
Tssr73714	transcription start site region 73714	476 bp upstream
Xrra1	X-ray radiation resistance associated 1	within coordinates