rs31836992 SNP Detail

Summary

• ID
  rs31836992
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:144415594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGA GTTCTGGGCG CGCCGAGGGG
  R
  TAGGGTCCCG GGCAGTAGTA GTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss46073937	mCV24316483	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss145992478	ENSMUSSNP4882320	ENSEMBL	ENSEMBL_Sanger	f	SNP	G				G
ss322484927	CHEV_7_152047762	CHEVERUD	SCREENING_POP	f	SNP				G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs31836992					SNP	G	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:144415594 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20003	CpG island 20003	within coordinates
Cpgi20004	CpG island 20004	784 bp proximal
Fgf4	fibroblast growth factor 4	within coordinates
Rr366757	regulatory region 366757	468 bp downstream
Rr366758	regulatory region 366758	1603 bp upstream
Tssr70358	transcription start site region 70358	462 bp downstream