rs31838543 SNP Detail

Summary

• ID
  rs31838543
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43060814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTTGTGTTG GGGACCCAAT GAGTGATGCA CCCACCCACC
  CACAGCTTCC ATCCCTGGGA GGGATGTTCT GCCCAGGGAG AAGGCCCTGG CCTGTCTGGA
  R
  CCAGTTCCCT GTCTTCATTG CAGACCCCCC ACAGGACCTG AGAGTGACTG TTTCCCAAGC
  AAACAGGACA GGTAGAAACG ATGGACAGAG GAAGCTGGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss46073959	mCV22794657	ABI	CRAMUS_MOUSE	f	SNP	A
ss149071815	ENSMUSSNP5442208	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322196859	CHEV_7_50666760	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs31838543					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43060814 () rs orientation: forward

Symbol	Name	Function Class
Siglecg	sialic acid binding Ig-like lectin G	within coordinates
Tssr65994	transcription start site region 65994	1970 bp downstream