rs31838879 SNP Detail

Summary

• ID
  rs31838879
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98152394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGACTAAG CCCCTTGTGA GCATCGTCAA GCAAAATCTA
  CACCATGATG TTTAGTCCTT CTTGAAGGAT ATTTGATCAC ACCATGAACC CCAGGATCGT
  K
  TTATTTACTA AAAGAAGCTA TTTCTACCTG TGGTGTGGCT CAGCCTTAGC ACATACCTTT
  ATTTCTTCTG GCTGGAATAC AGACACGACC TTAGTATTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39331179	mCV23433340	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	T	G
ss148453756	ENSMUSSNP395518	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G
ss325078964	CHEV_15_98084944	CHEVERUD	SCREENING_POP	f	SNP						T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31838879					SNP	G	T	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98152394 () rs orientation: forward

Symbol	Name	Function Class
Gm62000	predicted gene, 62000	within coordinates
H1f7	H1.7 linker histone	1473 bp downstream