rs31840903 SNP Detail

Summary

• ID
  rs31840903
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150319561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTT CAGAGTGTAT GATTTCTCGA
  R
  GTTCTTATAA AACTTGGGAG AGGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45576584	mCV24222397	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss148050602	ENSMUSSNP6123256	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss321428720	CHEV_4_149609213	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31840903					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150319561 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	1357 bp proximal
Eno1	enolase 1, alpha non-neuron	1617 bp upstream
Rr377416	regulatory region 377416	966 bp upstream
Rr605238	regulatory region 605238	within coordinates
Rr605239	regulatory region 605239	1358 bp proximal
Tssr40390	transcription start site region 40390	1581 bp upstream
Tssr40391	transcription start site region 40391	1666 bp upstream
Tssr40392	transcription start site region 40392	1685 bp upstream
Tssr40393	transcription start site region 40393	1698 bp upstream
Tssr40394	transcription start site region 40394	1712 bp upstream