rs31842129 SNP Detail

Summary

• ID
  rs31842129
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132764907 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAATATCT TTTGTATTGC
  TACATGTTAA ATAACCTTTG ATTTGACTGC ATGAATTTGA TTTTTGTTTG CAATTATCAC
  TGATTAAAGC TATTATTAAT TTAGCTAGTT GTGTACAAGG GTGTGCCTTA ATATATGTAT
  TAAAAAAGGA CTTCATTGAA ACCCACTATA ACATAAATAT ATCAACATTT TACAAATTTT
  M
  TATCAACCAT CAATCACAGA GATTTGACTT ATTAACTTTA CTATATGTGT TTTAATATCT
  GTATCAAACT GTGGTAAAAG CCTATAATTG AAATTATGTA ATATAAAATA TGTAAATAAA
  TCTTTAAAGA AGAAATATGT AGATACCGAA ATACTGCCTA GAGAGAGCTG GTATCCCAGG
  AGTGGTAATA CATGTGTAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48094483	NES11855054	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31842129					SNP	C	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48094483	NES11855054	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132764907 () rs orientation: forward

Symbol	Name	Function Class
Tas2r145-ps3	taste receptor, type 2, member 145, pseudogene 3	246 bp downstream