rs31844144 SNP Detail

Summary

• ID
  rs31844144
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:98176658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAATGGAG GCTTAGACTC
  TAGGTTCCGT AAGGCCAGAA CCTCTCCTTG CCCAGCCAGT GCTCGACAAA GGTGGGGAGG
  GGTCTGGTTT GCATGTGAAT GTGGACATGT GTGTGAAACT AGAGGGGATT GGAAAATGTA
  TGTGCAGCAC ACAAAACTTG TGTGAACTGG TACGAATGTG TGTCACTAGG GATGAGAGTG
  Y
  CTTCCTGGGA GGCTCTATGG AAGAATAAGA GTTTCCATTT AGTAAGCTCT GTGGTAGGCC
  AGGTATGAGG CCGAGCCTAG GCGGGCACAT TATCTCATTA AATACTCCCA GGAAGCTGAG
  AAGGAGGAAT GACCGCCAGG CCACAGAACA CTAACAGGCC CTTCAGAGGT GAGGGGATTT
  GCCCAAGTCC CTGAAAGCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49781480	NES12397319	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31844144					SNP	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49781480	NES12397319	PERLEGEN	MM_PANEL	f	SNP	C/T