rs31848485 SNP Detail

Summary

• ID
  rs31848485
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:75422211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAAG AGTTGCTTTG TTCATGGTGT
  S
  TCTTCACAGC AATGGGAACC TAAGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46075018	mCV25436551	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss145083914	ENSMUSSNP1123806	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C
ss322267956	CHEV_7_82917349	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31848485					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:75422211 () rs orientation: forward

Symbol	Name	Function Class
AU020206	expressed sequence AU020206	within coordinates
Rr380973	regulatory region 380973	1664 bp upstream
Tssr73052	transcription start site region 73052	428 bp downstream
Tssr73053	transcription start site region 73053	1603 bp downstream
Tssr73054	transcription start site region 73054	1648 bp downstream
Tssr73055	transcription start site region 73055	1670 bp downstream