rs31849693 SNP Detail

Summary

• ID
  rs31849693
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72541456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACTCTCATCA GCTACGCATA GCAAATGAAG CCAGAGGATT GAGAGTGAAG CAGACCCCTG
  AGGCTTAAGC CAGCAGTGGC GTTTGACTGA TGACTCCCAG GCTGTATATG TGTGTACCAC
  TCACAGCCGT GATAATGGCT TGAAAGAGAT CACAAACTTA CTTAAGAGGG GCTTTTTAAT
  TGTTTTTGAA CTTTGAAGAT GACAGTGTTG TGTTGTGATG TCCAAAATTG GACATAACTG
  GTGCTGAGTG TCCATCTCAG TGGTGATTAC TATCGATGAC GATGATGATG ATGATGATGA
  Y
  GACGACAACG ATGATGATGA TGGTTAACTA TGGTGCTGGG GGTTGAACCC AGGGCCTCAC
  ACATGCTAGG AAGGCACTCT GTCCTCTTCC ACACATGACC TCAGTCACTG TCCAGTTCTG
  TAGTGGCCAC CTTGGCTACT CAGGTGACTA AGCCAGTCAC CACTACAACC CCACCTCCTG
  ACCCAGCACT TTGACTCTTC ATAACTAGTC CCAAATCAGT GTCCCTCAGA GAGACAGGAG
  CTCCCAAGGG CTTTTTTGCA GTTCCGTATC ATCGTTGTCC TAGAATAAAC TGAGTCACCC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39332373	mCV23954903	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss148102841	ENSMUSSNP3114892	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31849693					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72541456 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	849 bp distal
Trappc9	trafficking protein particle complex 9	within coordinates