rs31852837 SNP Detail

Summary

• ID
  rs31852837
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:75423818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAACTTAAAT TGTCCCCTAA CTTTACAAAT TTAAATACTT
  TAAACCCCAA AATTTCCTCT TAAAGAAGTT TAAAAATCTC TCAACTGTGT GCTCTGGCAA
  Y
  ATAAAAAAAA AAAAATAAAG TACTTTTTAA AAAAAAATTT CAATAGGGAA AAAAAGGGCA
  CAATCAAGGC AAAACCAAAC TCCCACAGTG TAAACAACT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46075938	mCV25436546	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T	C
ss145083935	ENSMUSSNP4037909	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31852837					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:75423818 () rs orientation: forward

Symbol	Name	Function Class
AU020206	expressed sequence AU020206	within coordinates
Rr380973	regulatory region 380973	57 bp upstream
Tssr73052	transcription start site region 73052	1141 bp upstream
Tssr73053	transcription start site region 73053	within coordinates
Tssr73054	transcription start site region 73054	41 bp downstream
Tssr73055	transcription start site region 73055	63 bp downstream