rs31853207 SNP Detail

Summary

• ID
  rs31853207
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35285373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCTAGTGAA GGGAAAGGAC CAAGGGACTA GACCCTGTAG
  GCAACAGAGT AGGGTGGCTC GGAAGTCTGG GCACCTCCAG TTTGCATCAC CAGTAGCACG
  R
  GCGATCGACC GGGTAGGATT GTTACTTAGT TGGAGCTCTC TTCTTCATCA CAGTCTAACC
  CCATTTCAGG GGCCCAGCTT GGACCCCACC CCTAATATC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46075550	mCV23682720	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148813214	ENSMUSSNP5682091	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss322157985	CHEV_7_36370967	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31853207					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35285373 () rs orientation: forward

Symbol	Name	Function Class
Ankrd27	ankyrin repeat domain 27	296 bp upstream
Cpgi18874	CpG island 18874	within coordinates
Rgs9bp	regulator of G-protein signalling 9 binding protein	366 bp upstream
Rr167549	regulatory region 167549	within coordinates
Rr400265	regulatory region 400265	81 bp upstream
Tssr65908	transcription start site region 65908	284 bp upstream
Tssr65909	transcription start site region 65909	347 bp upstream
Tssr72043	transcription start site region 72043	398 bp upstream
Tssr72044	transcription start site region 72044	381 bp upstream
Tssr72045	transcription start site region 72045	346 bp upstream
Tssr72046	transcription start site region 72046	989 bp downstream