rs31854967 SNP Detail

Summary

• ID
  rs31854967
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126071894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTCCACCTA GAACTGGAGG GCCGGATGTG GTCTCCAGAG GCCCAGCTTG GGAGGGCGAG
  TCAACGGCAC CCCGCCACTG CAGGATGCCT CGAACAGAGC CTCTGACTGA ACGGCCCACT
  GAGCGGAGGG AGAAGCGCTT CTTGAGCTTT GGCTTTGAGG ATGTTGTAGA GGAAGGGACT
  GAGGAAGGAA GGGGGCCAGC CAGGTCCTCA GAAGATCGAG AAGGGCCCAA CACTGCTAGG
  GGCCCACCCA CCCTGCAGCT CTCAAGGGAC AGGTCGTGTG ATGGTGGGAT TTCCACACCA
  R
  GGCTCAATGG AGCCAGGACA GGTGGGGAGA GTGAGCCCGA GGCCCGAGCC ACCTCGGCTT
  CGAAGTGCTG CAGGAAGAGC TCAGCAAAAC GGCCAGAAAA AGCGGCCTCT GCTCCCGGCT
  CTGCATACTG TGGGTGGGAG GCCAGGTAGA GGCGAAAACG TCGGGCAAGA TCCAGGGCAG
  CTGCCCTCGC ATGGGACTCA CAGAACTCTT GCCAACTTGG GGGAGGGGGT GGTGGCAGCG
  CTGGCGGAGA AGGGAAGACC CCATCCTCTG GGGAAGGGGC ACCATTCATG ATGGGCCCCA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss46075474	mCV23679451	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs31854967					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126071894 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19695	CpG island 19695	4 bp proximal
Cpgi19696	CpG island 19696	1758 bp proximal
Rr655501	regulatory region 655501	1375 bp proximal
Sh2b1	SH2B adaptor protein 1	within coordinates
Tssr74717	transcription start site region 74717	1233 bp upstream
Tssr74718	transcription start site region 74718	327 bp upstream
Tssr74719	transcription start site region 74719	285 bp upstream