rs31856289 SNP Detail

Summary

• ID
  rs31856289
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16609946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACATGGCGA GTTTGAGGCC AGCCTCAGTA CAAGAGACCT
  TGCAAAAAAA AAAAAGAAAG GACAAAAGGG ATATGTGTGT GTATGTGTGT GTGCTCACAC
  R
  TGTGCAGCTG TGGAAATATC CAATCTAAGG TAGTTACAGT AGTTTACAGT GAGATGCAGC
  CTGAAGCCTG GTAGACAGAA AAAACAGTGA GCATATTAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45077335	mCV23427987	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss148671776	ENSMUSSNP1793359	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31856289					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16609946 () rs orientation: forward

Symbol	Name	Function Class
Rr13840	regulatory region 13840	746 bp distal
Ube2w	ubiquitin-conjugating enzyme E2W (putative)	1066 bp downstream