rs31856338 SNP Detail

Summary

• ID
  rs31856338
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117912804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGG GAGGAAAGGG TTTATTCGGC
  K
  TACACTTCCA TGCTGCTGTT CATCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45578407	mCV24294408	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss147298664	ENSMUSSNP3271242	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31856338					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117912804 () rs orientation: forward

Symbol	Name	Function Class
Gm70335	predicted gene, 70335	1931 bp upstream
St3gal3	ST3 beta-galactoside alpha-2,3-sialyltransferase 3	within coordinates
Tssr43029	transcription start site region 43029	852 bp upstream