rs31858841 SNP Detail

Summary

• ID
  rs31858841
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:63565746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGACATCGCA GGATGAAGAG CGCACCATCT AGGTCACAGC
  TCAGTGAAGG CTGCTATCAC CATCCAGCAG CTTTAAGAAT GCTATGAGTA CTTGCGATTC
  M
  GTCAGGAATA CAAGGCTGAT CACATCCTAC CATCTACCTT CATGTAGAAG TCCAGGGAGT
  ATTGAATTAA TCTGCTTTTG ATGAACTTAG TAGTTAGAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46076276	mCV25343814	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A	C
ss144834785	ENSMUSSNP2585502	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31858841					SNP	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:63565746 () rs orientation: forward

Symbol	Name	Function Class
E030018B13Rik	RIKEN cDNA E030018B13 gene	859 bp upstream
Gm53391	predicted gene, 53391	within coordinates
Klf13	Kruppel-like transcription factor 13	Intron
Rr647715	regulatory region 647715	333 bp proximal
Rr647716	regulatory region 647716	1491 bp proximal
Tssr66988	transcription start site region 66988	882 bp upstream
Tssr66989	transcription start site region 66989	1243 bp upstream