rs31863002 SNP Detail

Summary

• ID
  rs31863002
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:95203861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTAGCCCT AAAACCTTTG
  GTTTTCCCTT CAGGACTTTG TGTTCTATGC TCCCCGGCTT CGGATTAACA AGCGGATCTT
  GGCCCTGTGC ATGGGAAATC ATGAGCTGTA CATGCGTCGG CGCAAGCCTG ACACCATTGA
  GGTGCAGCAG ATGAAGGCCC AGGCTCGGGA AGAGAAGCAC CAGAAGCAGA TGGAGCGGTA
  R
  GTGCTATATA GAGTGCTGGA ATTAGGACGA GTGCAGTGGT AAGGAAGCTT TGGAAGGTTC
  CTGGCTTGCT TAGGGAGTGG AATCATCCCA GGACAAGGGA CTTGTGAATT GGAAGGGAGG
  ACACCCCAGA TATTCAGTCT CAGCACAGAA ACAGGCATCA GAAATCTTGG ATTTCAGAGG
  TTGTAAGAGG GAGGAGCCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49782699	NES12413080	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31863002					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49782699	NES12413080	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:95203861 () rs orientation: forward

Symbol	Name	Function Class
Msn	moesin	within coordinates
Rr692548	regulatory region 692548	1973 bp distal
Tssr161521	transcription start site region 161521	118 bp downstream
Tssr161522	transcription start site region 161522	73 bp downstream