rs31863003 SNP Detail

Summary

• ID
  rs31863003
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:95202704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGATATGA CATTGTATGT TCCCATAAGA GTTAATCCAG
  TTGGGTCAGT CAGTCACCTG GCTAAGGGAG CGCTGGTCAG AAACGTGTAA GTTCCTTACC
  K
  CTGCCTTCTG AGAATAAGTA AGTAGGAGAA ATAAGTATCT CTCTAATGAG GTGGTGTACT
  TTTTCTTCCC AAAGTTTCTC CTCCATAGTT TAGGCCCTAT                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49782700	NES12413105	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	G	G	T	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31863003					SNP	T	G	G	G	G	G	T	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49782700	NES12413105	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:95202704 () rs orientation: forward

Symbol	Name	Function Class
Msn	moesin	within coordinates
Rr692548	regulatory region 692548	816 bp distal
Tssr161521	transcription start site region 161521	985 bp upstream
Tssr161522	transcription start site region 161522	1043 bp upstream