rs31866908 SNP Detail

Summary

• ID
  rs31866908
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44890364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCACAGCA AACTCCTTCG
  CGTGGGTAGA GGAAGGAGGC GAGACGGGAG CAATAGCGCA GAGACACAGA AAGGGCAGGG
  AAGGCCTCGT GGGTTCACGA TGTGGGAACT GCCTTCCAGG GGGCCGGAGG GCCTGGGGAG
  GTCGCTAAGC TTCCATGCCG AGGCCTCCCG GACCTTTTCA CCCAGACAGC CGCTGGAGAG
  Y
  TCAGCGGGGA TCTCGAGGCC CGGGCGGTGA GACCGACGGG GCGGCCATTG TGCTGCCCCA
  GGCTCTCCAC AGGACGCCAG GAAGGAGGGA GGGAGGGGGG AGTCGCGAGG TCAAGGTCAC
  CGTGCCCCCT CTCCGTCAGA ACCCGGAAAA CTGCCTCCTC GCTCCTCGGC TGCGCCTGCC
  TGAGGCCAGG CCTGAGAGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss46078000	mCV27566873	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss149131932	ENSMUSSNP4359833	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs31866908					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44890364 () rs orientation: forward

Symbol	Name	Function Class
Cd37	CD37 antigen	1825 bp upstream
Cpgi19038	CpG island 19038	within coordinates
Rr380753	regulatory region 380753	within coordinates
Slc6a16	solute carrier family 6, member 16	145 bp upstream
Tssr66503	transcription start site region 66503	134 bp upstream
Tssr66504	transcription start site region 66504	169 bp upstream
Tssr72353	transcription start site region 72353	1874 bp upstream
Tssr72354	transcription start site region 72354	1837 bp upstream
Tssr72355	transcription start site region 72355	1807 bp upstream
Tssr72356	transcription start site region 72356	1653 bp upstream
Tssr72357	transcription start site region 72357	1645 bp upstream
Tssr72358	transcription start site region 72358	1620 bp upstream
Tssr72359	transcription start site region 72359	1590 bp upstream
Tssr72360	transcription start site region 72360	1553 bp upstream
Tssr72361	transcription start site region 72361	1530 bp upstream