rs31867815 SNP Detail

Summary

• ID
  rs31867815
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136939092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgcctcccc agtgctggga ttaaaggcat
  gtgccacgac gcccggctAA ATCTACTAAT TTGAATTATA TAAAAAAAAT CATTCTTACT
  TGgtgtgtgt gtgtgtgtgt gtgtATACAT gcgcacgtga gcatgtcaga ggacaacttg
  Y
  aggagtTCAT TGTTCTGGAT TTGGAACTGA GGACATCAGT TTTAGCTGTG AGTGACTTTA
  TGTGAGGAGC AGCTATCTGG TGTTTTTGTT Gtttgtattt tgaagacaag ttttcaacgt
  gtagccctgg ctgttctgga actctataga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45079197	mCV23233631	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss145563697	ENSMUSSNP1869550	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss319997367	CHEV_1_138907931	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31867815					SNP	C	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136939092 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	434 bp distal
Rr419563	regulatory region 419563	951 bp distal