rs31870903 SNP Detail

Summary

• ID
  rs31870903
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:151246996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCAATTCC CAGTAACCAC
  ATGGTGGCTC ACAACCATCT GTAATGGGAT CTGATGCCCT CTTCAGGTGT GTCTGAAGAC
  AGCTACAGTG TACTCATATA TATATATAAA ATAAAAAATT TTTTAAAGAG GTTTGATTTA
  GGAAAAGGTT TGAATTAACG GTATTTCTGT CCCTTCCTCT TCCCTTCACT CACTCACTCA
  Y
  TCACTCATTC ATTCATTCAT TCCTTTTCTT CCTCCCTCCC CACCTCCTTA GGTTCCAGGA
  ATTCCACTCA GAGCGTCATG CATGTTAAAC AAATGCTCTT CCTTAGACGT ATTCCCTAGT
  CCATGGACAT TTTCTGAAAA ATCTGTTTTT TAAAAAAGTC TGTTATAACC CAGAGATGTA
  ATTTATAAAA CCATAAATGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45079239	mCV23130630	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31870903					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151246996 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr420285	regulatory region 420285			325 bp proximal
Swt1	SWT1 RNA endoribonuclease homolog (S. cerevisiae)			Intron
				Noncoding-Transcript-Variant