rs31872050 SNP Detail

Summary

• ID
  rs31872050
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79510025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAT GGAATGTAGT CTATAATAAA
  R
  TTTTTATCTC AGTGAGAATT TTAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39334990	mCV25428288	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss148201232	ENSMUSSNP4190280	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss325027736	CHEV_15_79456254	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31872050					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79510025 () rs orientation: forward

Symbol	Name	Function Class
Fam227a	family with sequence similarity 227, member A	within coordinates
Rr390973	regulatory region 390973	1768 bp upstream