rs31873024 SNP Detail

Summary

• ID
  rs31873024
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137874072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAG TTGCTAACCC TGGAGATTAG
  Y
  TAGTATGTTG GTTGGTGAAC TCTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45579465	mCV24055343	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss147634464	ENSMUSSNP4340004	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss321370850	CHEV_4_137702676	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31873024					SNP	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137874072 () rs orientation: forward

Symbol	Name	Function Class
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3	within coordinates
Tssr39828	transcription start site region 39828	654 bp upstream
Tssr39829	transcription start site region 39829	669 bp upstream
Tssr39830	transcription start site region 39830	706 bp upstream