rs31873349 SNP Detail

Summary

• ID
  rs31873349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83530717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTT AGTGAAAAGA CAGTAACTGC
  R
  AAAAGCCATC TGAGAAACAT AACAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46078153	mCV24812023	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss145197745	ENSMUSSNP57454	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31873349					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83530717 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19376	CpG island 19376	701 bp proximal
Rr381056	regulatory region 381056	1424 bp downstream
Rr650492	regulatory region 650492	1851 bp distal
Tlnrd1	talin rod domain containing 1	within coordinates
Tssr2320	transcription start site region 2320	709 bp upstream
Tssr73402	transcription start site region 73402	1945 bp downstream