rs31874724 SNP Detail

Summary

• ID
  rs31874724
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60630180 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAATATGT AAATATAATA
  TAATATAATA TAATATATGT ATAGTAAGTA TGTGTGTGTG TGTGTATACC TCCATTCTTT
  GGCTTGTGGC TCCTTCTCTT ATGCTCAAAG CCCATGATAC TGGACCAAGT CCTTATACTT
  CCAATTCTAT TGTTCTACCA ACCTGTTAGC CTCTTTTCCC ATTAATGATC AACTTTATAA
  K
  ATTGTATTAG GCCAACCTGG ATAATCCAGG ATCATTGCCT TATTTTAAGT TCTGCTGCTT
  ATGAATCAGA ATTATATCTC TAGTCTTAAT TCTCCTCTGT CGTATAGAAT GACATACTCA
  GATCCAGGGT CTCTTTAGAG CTGCATTATT CTGCATGATA AAACTAATTC TTAGGTAAAG
  GGAAAGGCTA AGAACCATCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss39335335	mCV22682182	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss147994458	ENSMUSSNP3242970	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs31874724					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60630180 () rs orientation: forward

Symbol	Name	Function Class
Gm48947	predicted gene, 48947	1900 bp upstream
Rr303268	regulatory region 303268	1421 bp proximal
Rr313850	regulatory region 313850	1422 bp proximal