rs31875633 SNP Detail

Summary

• ID
  rs31875633
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101311290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTTTGTGT TTTTTTGTTT TTGCTTTTGT TTTTCAAGAC
  AGGGTTCCCC TGTGTATCCC TGGCTGTCCT GGAACTCACT CTGGAGACCA GACTGGCCTC
  R
  AAATCAGAAA TCTGCCTGAC TCTGCCTCCC AAGTGCTGCC ACCATTGCCT GGTTTAGTAT
  TTTTTTAGAT TTATTTATGC ATTATGTGTA CAGTGTTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46078815	mCV24196631	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs31875633					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101311290 () rs orientation: forward

Symbol	Name	Function Class
Clpb	ClpB caseinolytic peptidase B	1668 bp upstream
Cpgi19507	CpG island 19507	1477 bp proximal
Rr400489	regulatory region 400489	1414 bp upstream
Rr652442	regulatory region 652442	117 bp proximal
Rr652443	regulatory region 652443	1060 bp proximal
Rr652444	regulatory region 652444	1875 bp proximal
Rr652445	regulatory region 652445	1929 bp proximal
Tssr68257	transcription start site region 68257	1520 bp upstream
Tssr68258	transcription start site region 68258	1531 bp upstream
Tssr68259	transcription start site region 68259	1552 bp upstream
Tssr68260	transcription start site region 68260	1644 bp upstream
Tssr68261	transcription start site region 68261	1658 bp upstream