rs31883997 SNP Detail

Summary

• ID
  rs31883997
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:66842911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACTGCTCT AGACAGCATA
  CAATAATGGC TGAGGACCAA AAGTGTCAAG AGACGTGACG TTTCCTATAA CTAGTCTGTT
  GTCTAAGTGG GAGACATTGA ATAAATAACC AAAAAGCAGA AGTTTAAGAG AACAAAGGCT
  AATTTTAAGT AGAGGAATGC TGCAGGATTT GGAGAAAAAT AAAATATCAT CCTGATCTAA
  K
  ATGATGCAGA AATCCCTTTA GATGAGCTGG AACTAAAGCC AGACAAAGTG AACTTCAGAT
  AGACAGAGGT GCATGGATGT AATTTCAGAC ATTCAAGTTG ATACAAATAC CATTAGGTCA
  GACAGAGCTG AGGAACCAAC ATTGTTCACT GATGTTCCTT TGAATTTCTA TGGGTAGATT
  TGAAGAATAA TAAGGGCTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47599907	NES11431333	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31883997					SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47599907	NES11431333	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:66842911 () rs orientation: forward

Symbol	Name	Function Class
Gm64317	predicted gene, 64317	within coordinates
Marchf1	membrane associated ring-CH-type finger 1	within coordinates
Rr382200	regulatory region 382200	1173 bp downstream
Tssr77555	transcription start site region 77555	1884 bp upstream