rs31888103 SNP Detail

Summary

• ID
  rs31888103
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68258549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAAAATCC ACTATTATCA
  AGAATGGCAA AAAAATAGAG TAGTGGAACG TTGGCAGTTC TTCATTTAAT TTCTTGAATA
  GATTCCAGAA AAATTCTCAT TATCTAATTT ATACCTGTTC ATAAATTCAT TTAAAAGCCA
  ATGGCACACT ATCATAAGTT ATTTGAAAAA TCAATCATGC CTTGGAATAA ATGTTATAAA
  R
  AGAAAATATA ATTGAAGAAG TGATATGATA AACCCATGGG AAAACCTATA ATAGAAAGAT
  ATAATAATCA ATATACCATG TAAAAAAACA CCTGTAAATT ATTAACAGCT GAAGAAGATA
  AATTTAAAAA AATAGACTTT TATTTAAGTG GTAAAGACTC ATTGTTGTTA ATTATAAGAA
  CTTCAACAGT ACATATTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45582159	mCV24164830	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146487464	ENSMUSSNP5546769	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31888103					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68258549 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	758 bp upstream