rs31893152 SNP Detail

Summary

• ID
  rs31893152
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:113416778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGA TGCATGGATT TCCCCTCCAA
  R
  CCCAGCACTC TCAGGGGCAC AAAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46081094	mCV23606281	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss145683906	ENSMUSSNP501326	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss322424750	CHEV_7_120961059	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31893152					SNP	G	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:113416778 () rs orientation: forward

Symbol	Name	Function Class
Rr653874	regulatory region 653874	350 bp distal
Rr653875	regulatory region 653875	577 bp proximal
Spon1	spondin 1, (f-spondin) extracellular matrix protein	within coordinates
Tssr74335	transcription start site region 74335	553 bp upstream