rs31895655 SNP Detail

Summary

• ID
  rs31895655
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44151835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCTACAGAT GTGCTTTGAC ATGCCGGGCC TTTTGTTTTT
  AAAATTGTTT CTAATGTTTT AAATTTATTT ATTTTATGTT GAGTGCATTG TAGTTGTCTT
  Y
  AGACACCCTA GAAGAGGGCA TCAGATTCCA TTAAAGATGG CTGTGAGCCA CCTTGTGGTT
  GCTGGGAATT GAACTCAGGA CCACAGGAGC AGCCAGTAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46081297	mCV25287577	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss149113640	ENSMUSSNP5057025	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31895655					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44151835 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18970	CpG island 18970	1961 bp distal
Garin5a	golgi associated RAB2 interactor 5A	925 bp downstream
Gm44646	predicted gene 44646	within coordinates
Mybpc2	myosin binding protein C, fast-type	within coordinates
Rr646111	regulatory region 646111	712 bp distal
Rr646112	regulatory region 646112	232 bp distal
Rr646113	regulatory region 646113	482 bp distal