rs31902907 SNP Detail

Summary

• ID
  rs31902907
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:118086003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTATTTTAAT TTGAAATGCC GATTGTTGGC CCAGCCCTTT
  ATTTTCCAGT CTGGAGCTGA GGTGAGCTGC CTCCTTTAAG GTAGGCACAG TCCCCACACC
  M
  TCCACCCTCT TATTTATCTC CCTGCCTTTA GGCTGCTAAG TTTGTAACTC CTGACCTGAA
  CTAGCACATA CTTAAAAACA CATTTCCTCA CCCAAAACT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46081383	mCV27568906	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss145780770	ENSMUSSNP892956	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31902907					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:118086003 () rs orientation: forward

Symbol	Name	Function Class
Itpripl2	inositol 1,4,5-triphosphate receptor interacting protein-like 2	within coordinates
Rr381380	regulatory region 381380	within coordinates
Rr654485	regulatory region 654485	1545 bp proximal
Rr654486	regulatory region 654486	1742 bp proximal
Tssr74438	transcription start site region 74438	1123 bp upstream
Tssr74439	transcription start site region 74439	756 bp downstream
Tssr74440	transcription start site region 74440	1473 bp downstream