rs31905807 SNP Detail

Summary

• ID
  rs31905807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148528194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT CCATCGGGGG AGCAGTGTTC
  R
  TAATCCACTG CCAAACCAGT ATTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45584133	mCV24215100	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss148007685	ENSMUSSNP1774975	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G
ss321420464	CHEV_4_147817846	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31905807					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148528194 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15303	CpG island 15303	441 bp proximal
Gm23303	predicted gene, 23303	252 bp upstream
Rr604684	regulatory region 604684	998 bp proximal
Rr604685	regulatory region 604685	1024 bp proximal
Tssr44605	transcription start site region 44605	718 bp downstream
Tssr44606	transcription start site region 44606	996 bp downstream
Tssr44607	transcription start site region 44607	1007 bp downstream
Ubiad1	UbiA prenyltransferase domain containing 1	within coordinates