rs31909207 SNP Detail

Summary

• ID
  rs31909207
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:89268675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAGGGGA GGATGAGAAT
  GGTACGTGTC CCAGACACAC CCAGATGGTC ACTCGAATGA CCCTCATCCC AGGCTCTCGC
  GTTCAGCCTG AGAGCCCACC AGAATAACTA CCCCTACCCT TGGTCCCTGG TGGCGATGGT
  GGAACTGGCC TCTCCGGTTT CTGGTAATTT CATCAGGGCC GCATCATGTT GCTAAGACTC
  R
  AGATAACATC TCCCTGTGTG ATAACCCTTC CTTGCCAGCG CTCCTGTGTA GCCTATAGGG
  TGTAGGGTGA ACTTAGGCTG ACGGGGGTCT TTAGGGCAGA AGGTAATGGG GTGAGATGTT
  GGCAGAGTAT ACATGAACAG TGCCATTTGT CCCTTGTACC CCTGTGCAAA GAAGGAAGGG
  GCAGGAGCTG GGACCACAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48101800	NES12061465	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31909207					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48101800	NES12061465	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:89268675 () rs orientation: forward

Symbol	Name	Function Class
Gm62017	predicted gene, 62017	within coordinates
Klhdc7b	kelch domain containing 7B	445 bp upstream
Tssr4689	transcription start site region 4689	388 bp upstream
Tssr132668	transcription start site region 132668	403 bp upstream
Tssr132669	transcription start site region 132669	416 bp upstream
Tssr132670	transcription start site region 132670	430 bp upstream