rs31911591 SNP Detail

Summary

• ID
  rs31911591
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:121749327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTCCATAT TGCTGTTTAT
  CAACAAAGGA AGTCAGGACA GGAACTCAAT CAGGGCAGGA ACCTGGAGGC AGGAGCTGAT
  GCAGAGGCCA TGGAGGGGTG CTGCTTATTG GCTTTCTCCC CGTGGCTTGC TCAGCCTGCT
  TTCTTATAGA ACCCTGGACC ACCAGCTCAG GGGTGGCCCC ACCCACAATG GGCTCCGCCC
  Y
  CCCCCCTTGA TCACTAAATG AGAAAATACC ATACAGCTGG ATTTCATGGA GGCATTTGCT
  CAACTGGAGC TCCTATGGTC CAGGTAGTTA AAAAATGGCT GTCTACTAAC AGAAGGTTCA
  AGAATCCAGC AGTTGTCCAG TCTGTGAGGC TGGCTGTCTC AGCTGGTCTT CAGTATATGC
  TGGAATCCTA AAGATGTAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46082684	mCV23398908	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T	T
ss145833562	ENSMUSSNP6699096	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31911591					SNP	C	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:121749327 () rs orientation: forward

Symbol	Name	Function Class
Dctn5	dynactin 5	1060 bp downstream
Gm15489	predicted gene 15489	within coordinates
Rr159748	regulatory region 159748	1274 bp proximal
Rr163514	regulatory region 163514	662 bp proximal
Rr163515	regulatory region 163515	877 bp proximal
Tssr68863	transcription start site region 68863	1808 bp downstream