rs31911607 SNP Detail

Summary

• ID
  rs31911607
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91179137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACT GGCCCTGCAT AGGTCACACC
  R
  GCCTGATTTC AGCACAGCAC ATAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45084590	mCV25408061	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss144943450	ENSMUSSNP5155978	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss319839838	CHEV_1_93147992	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31911607					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91179137 () rs orientation: forward

Symbol	Name	Function Class
Cpgi571	CpG island 571	324 bp distal
Rr366958	regulatory region 366958	1169 bp downstream
Tssr8065	transcription start site region 8065	1199 bp downstream
Tssr8066	transcription start site region 8066	1105 bp downstream
Tssr8067	transcription start site region 8067	1035 bp downstream
Tssr8068	transcription start site region 8068	907 bp downstream
Tssr8069	transcription start site region 8069	829 bp downstream
Tssr12938	transcription start site region 12938	1340 bp upstream
Tssr12939	transcription start site region 12939	6 bp upstream
Ube2f	ubiquitin-conjugating enzyme E2F (putative)	within coordinates