rs31912378 SNP Detail

Summary

• ID
  rs31912378
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78232120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCC CTGAGCACGT GACACTTTGG
  R
  ACACTGGACA CACACCATGT CATTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39339924	mCV27573775	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	G
ss148183110	ENSMUSSNP3545403	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31912378					SNP	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78232120 () rs orientation: forward

Symbol	Name	Function Class
Csf2rb	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	within coordinates
Mir7676-2	microRNA 7676-2	679 bp upstream
Rr505249	regulatory region 505249	468 bp proximal
Tssr131932	transcription start site region 131932	147 bp upstream
Tssr131933	transcription start site region 131933	231 bp upstream
Tssr131934	transcription start site region 131934	295 bp upstream
Tssr131935	transcription start site region 131935	360 bp upstream
Tssr131936	transcription start site region 131936	1026 bp upstream
Tssr131937	transcription start site region 131937	1053 bp upstream
Tssr131938	transcription start site region 131938	1107 bp upstream
Tssr131939	transcription start site region 131939	1175 bp upstream
Tssr131940	transcription start site region 131940	1248 bp upstream
Tssr131941	transcription start site region 131941	1342 bp upstream
Tssr131942	transcription start site region 131942	1380 bp upstream