rs31913630 SNP Detail

Summary

• ID
  rs31913630
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152390031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCACCAAA ACTGTGAGAT
  TCCAGAAGCC TCAAAGACGT GTGCCCTGGT TTGTAGTAAG CCAGGGAAGG CTCCAGGAGA
  GCCTCAGGCC AGTCCAGCTG GAAGTGTTCC CCGGGCCACC CGGCCCATCG CCTCTGCAGC
  CAGGACTCCA CGATCACTTC CAAACTGCAG TGGTGCTGAC CAAGGGTGAA GGTGGGGATG
  K
  GGCCAGAGCA CTGCTAATTA CCACGCCCTC CTGTGCTTGG GCCTCCCATC AGGGTCAGGA
  TGGCCTCCCT CACAGGGGTG TTATGGGAAG ATGAGCTGGG TGGCATAATG AAATCTTAGG
  ATGAGAACCG GGTTTCTGTG TGTTAGAAAG CAGTGTGTGC TAACATGTGT CCAAAAAAAC
  ATTCTGCCAG CTCGCAAGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45585492	mCV23461753	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss321434106	CHEV_4_151679683	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31913630					SNP	G	T	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152390031 () rs orientation: forward

Symbol	Name	Function Class
Gm70210	predicted gene, 70210	276 bp upstream
Icmt	isoprenylcysteine carboxyl methyltransferase	within coordinates
Rnf207	ring finger protein 207	1445 bp downstream
Rr605837	regulatory region 605837	505 bp distal
Tssr44828	transcription start site region 44828	304 bp upstream
Tssr44829	transcription start site region 44829	291 bp upstream