rs31915676 SNP Detail

Summary

• ID
  rs31915676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161346508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTCTGTCA ATGGAATGTG ATGATACCAA TAGTGGGCTG
  GGTTAGTTAA CCATCAAAAC AATCCCCCAT AGACATGCCT GTAGAATAAT CTGATATAAG
  Y
  GACACCTAAT TAAGGCTCCC TTCTCAAGTT GTGTCAATTG ACGCTAACTT ATTAACTAAT
  TGTTAACTAA TCAATATACT TCTCAAATAC TCCAGGTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45084542	mCV24543261	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss145915626	ENSMUSSNP2616805	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31915676					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161346508 () rs orientation: forward

Symbol	Name	Function Class
Gm31815	predicted gene, 31815	within coordinates
Rr421813	regulatory region 421813	1248 bp distal