rs31921501 SNP Detail

Summary

• ID
  rs31921501
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16185499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACGG AGTTTAGTCT GTCCTTCTGC
  Y
  GCCAGAAGGC CTCTCTCTAT ATAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46083577	mCV22944165	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148386687	ENSMUSSNP2917729	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss322110693	CHEV_7_17036923	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31921501					SNP	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16185499 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18377	CpG island 18377	1200 bp proximal
Rr400123	regulatory region 400123	1043 bp upstream
Rr642666	regulatory region 642666	584 bp proximal
Rr642667	regulatory region 642667	957 bp proximal
Tmem160	transmembrane protein 160	1368 bp upstream
Tssr64613	transcription start site region 64613	1353 bp upstream
Tssr64614	transcription start site region 64614	1450 bp upstream