rs31923838 SNP Detail

Summary

• ID
  rs31923838
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79512278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCCTCCC CGAGTGGCCC
  GAGCCCTGTG GTGGAGAGGA CTCCGGGATA CCACAAACCC TACAGTCCTG GGCTGGGATG
  TAGCAGTGAT AGTGAGCTGG ACTAACATGC AGCCCCAGCA GCAGGAAAGG AGGAAAGTTG
  TCTTATGCTG GAAGAAGAAT GGTTCCCAGG TTAAGACATA TACTGCTCTT CTAGAGGACC
  R
  GAGTTCAGTT CTGAGCACCC ACATCAGGAA GCTCACAATG GCCTTTAACT CCAGCTCCAG
  AGGATCTGGT GCCCTCTTCT GGCCTCCATG TGCATCCAAA ACCTGGGTCA TACAATAGAC
  ACGTATACAC CCAACATTGA CTAAATATGA AAAGAAATCC AGGGTTGCAG AGATGACTCA
  GCAGTTATGC TTGCCGCCGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39341101	mCV25428276	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31923838					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79512278 () rs orientation: forward

Symbol	Name	Function Class
Fam227a	family with sequence similarity 227, member A	within coordinates
Rr390973	regulatory region 390973	within coordinates
Rr505687	regulatory region 505687	66 bp proximal
Rr505688	regulatory region 505688	260 bp proximal