rs31924038 SNP Detail

Summary

• ID
  rs31924038
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72542388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGCTAGC TGGTGATACT
  CTGGACACTT GTCTGGTGCC TCCCCAGAGC CTGGTCTCTT GGATCGTAGA GGAACTTGTA
  CGGGAATGGG ATCAATTCTG ATGAGAGATG TGACCGGAAC CCTGTGTGCG CAGAAGCATG
  CCATGGCCAG GGAACCCCAC ACGGCGGCAT CTGAACTTGA CCTTACTCAA ACTGAAACAA
  M
  TGCATCTCCC TGACTCCTCC TCTTCTCACA TAAACGGGTC TGCTTTCAGC AGGAACTCAG
  GAGATCAGGG AGCCCACAGA TGCCCCTGCC CCTGCTCCAG ACACCATGTA AGAGTGACAC
  ATGAGTAGCT GCTTTCCTAG GAGGCAGGGC TCTGGTCCAG CCGTGCACAG CTAGTTACTG
  ATCCCTCAGA GAAAGCCTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39341197	mCV23954914	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
ss148102863	ENSMUSSNP4841714	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31924038					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72542388 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	1781 bp distal
Trappc9	trafficking protein particle complex 9	within coordinates