rs31924432 SNP Detail

Summary

• ID
  rs31924432
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98153714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTCTTCTT GTCTCTACTC TTTTCCTTTT TTTTTTTTTT
  AAACTTTAAT GCTCACTCAC TGACCCCCTC CCAGTCACTC CCTCCCACAA TCCTCTCCCC
  Y
  GCCCCACCCC AAAGGAAGGC ACTTCTCTGG GTTCCGTGGG ACTAGCGGAA TCTCAGCTCT
  TACCTCCTGA GCCTTAGCTA TAGATCTCCC CTCAACATG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39340817	mCV23433337	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss148453776	ENSMUSSNP478829	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss325078969	CHEV_15_98086264	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31924432					SNP	T	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98153714 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7649	CpG island 7649	930 bp proximal
Gm62000	predicted gene, 62000	437 bp upstream
H1f7	H1.7 linker histone	153 bp downstream
Rr311340	regulatory region 311340	185 bp proximal
Rr391174	regulatory region 391174	1631 bp upstream
Tssr136230	transcription start site region 136230	1463 bp downstream
Tssr136231	transcription start site region 136231	1576 bp downstream